So I didn't read everything, but
@DocZ gave good advice. Really you should do fish less cycles in any situation involving aquariums... simply test the water until the levels are where they're supposed to be at. The water will get yucky during the cycle, this is normal. YOUR AMMONIA LEVELS AREN'T SUPPOSED TO BE DOWN

. Your tank is correctly cycling if they're up. Fish tanks are a patient process! Once the nitrates are up and the ammonia is 0(this takes like a month). Then do a big water change and slowly start stocking the tank.
It's not that bad to anyone reading, it's just not as simple as filling a tank with water either and throwing stuff in. You need to understand the basic chemistry(harder than it sounds). Not trying to be rude by any means, just putting it out there!